Gut metagenome: MPTP mouse models - SRA

SRX17000439: Gut metagenome: MPTP mouse models
1 ILLUMINA (Illumina NovaSeq 6000) run: 88,380 spots, 44.2M bases, 16.6Mb downloads

Design: Total DNA was extracted from mouse cecum digesta. Partial 16S rRNA sequences were determined using the Illumina NovaSeq 6000 at Bmlbosis (Ankara, Turkey). Briefly, the V3-V4 region was amplified using spesific primers. The Nextera XT index kit was used to attach unique identifiers to both 5 and 3 ends. After all PCR products were cleaned up using AMPure XP magneitc beads, equal quantities of each of the amplicons were pooled.

Submitted by: Burdur Mehemet Akif Ersoy University

Study: MPTP induced mouse models

PRJNA867416 • SRP390653 • All experiments • All runs

show Abstracthide Abstract

This study aimed to investigate if the impact of MPTP on gut microbiota differs depending on the administration regimen of acute and subchronic.

Sample:

SAMN30201266 • SRS14585836 • All experiments • All runs

Organism: gut metagenome

Library:

Name: M2C9

Instrument: Illumina NovaSeq 6000

Strategy: AMPLICON